STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein; Belongs to the BI1 family. (348 aa)    
Predicted Functional Partners:
tmbim6
Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family.
   
  
0.677
LOC101071420
BSD domain containing 1.
   
    0.636
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
      
 0.582
LOC101069899
Aquaporin 10a; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.580
clrn3
Clarin 3.
      
 0.566
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.566
LOC101069505
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.
      
 0.565
LOC101066705
Ubiquinol-cytochrome c reductase core protein 2a.
   
 
 0.545
LOC101063187
Ubiquinol-cytochrome c reductase core protein 2b; Belongs to the peptidase M16 family.
   
 
 0.545
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.513
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.