Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BFSP1Beaded filament structural protein 1. (668 aa)    
Predicted Functional Partners:
cryba2
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
      
 0.890
LOC101064246
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.882
crybb1
Crystallin, beta B1; Belongs to the beta/gamma-crystallin family.
      
 0.849
galk1
Galactokinase 1.
      
 0.741
LOC101076653
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
  
 0.723
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
      
 0.714
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
      
 0.656
LOC105416511
Uncharacterized protein.
    
   0.624
synm
Synemin, intermediate filament protein; Belongs to the intermediate filament family.
    
 
 0.583
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
      
 0.576
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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