STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074394Si:ch211-184m13.4; Belongs to the G-protein coupled receptor 1 family. (339 aa)    
Predicted Functional Partners:
eif2b1
Eukaryotic translation initiation factor 2B, subunit 1 alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.641
eif2b2
Translation initiation factor eIF-2B subunit beta; Catalyzes the exchange of eukaryotic initiation factor 2- bound GDP for GTP; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.570
oxgr1
Oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 2.
     
  0.520
SUSD2
Sushi domain containing 2.
      
 0.426
gpsm2
Uncharacterized protein.
     
  0.422
LOC101068976
Cannabinoid receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.416
CNR1
Cannabinoid receptor type 1B; Involved in cannabinoid-induced CNS effects; Belongs to the G-protein coupled receptor 1 family.
   
 
  0.412
cnr1a
Cannabinoid receptor type 1A; Involved in cannabinoid-induced CNS effects; Belongs to the G-protein coupled receptor 1 family.
   
 
  0.412
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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