Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSTRUP00000076847 | mydgf | ENSTRUP00000076847 | ENSTRUP00000029366 | annotation not available | Myeloid-derived growth factor. | 0.556 |
cope | mrpl4 | ENSTRUP00000029544 | ENSTRUP00000021382 | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | Mitochondrial ribosomal protein L4. | 0.441 |
cope | mydgf | ENSTRUP00000029544 | ENSTRUP00000029366 | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | Myeloid-derived growth factor. | 0.592 |
creld2 | mydgf | ENSTRUP00000003109 | ENSTRUP00000029366 | Cysteine-rich with EGF-like domains 2. | Myeloid-derived growth factor. | 0.470 |
mrpl4 | cope | ENSTRUP00000021382 | ENSTRUP00000029544 | Mitochondrial ribosomal protein L4. | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | 0.441 |
mrpl4 | mydgf | ENSTRUP00000021382 | ENSTRUP00000029366 | Mitochondrial ribosomal protein L4. | Myeloid-derived growth factor. | 0.403 |
mrpl4 | sacm1l | ENSTRUP00000021382 | ENSTRUP00000008517 | Mitochondrial ribosomal protein L4. | SAC1 like phosphatidylinositide phosphatase a. | 0.411 |
mydgf | ENSTRUP00000076847 | ENSTRUP00000029366 | ENSTRUP00000076847 | Myeloid-derived growth factor. | annotation not available | 0.556 |
mydgf | cope | ENSTRUP00000029366 | ENSTRUP00000029544 | Myeloid-derived growth factor. | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | 0.592 |
mydgf | creld2 | ENSTRUP00000029366 | ENSTRUP00000003109 | Myeloid-derived growth factor. | Cysteine-rich with EGF-like domains 2. | 0.470 |
mydgf | mrpl4 | ENSTRUP00000029366 | ENSTRUP00000021382 | Myeloid-derived growth factor. | Mitochondrial ribosomal protein L4. | 0.403 |
mydgf | sacm1l | ENSTRUP00000029366 | ENSTRUP00000008517 | Myeloid-derived growth factor. | SAC1 like phosphatidylinositide phosphatase a. | 0.403 |
mydgf | slc35b1 | ENSTRUP00000029366 | ENSTRUP00000058918 | Myeloid-derived growth factor. | Solute carrier family 35 member B1. | 0.444 |
mydgf | ssr4 | ENSTRUP00000029366 | ENSTRUP00000073499 | Myeloid-derived growth factor. | Signal sequence receptor, delta. | 0.556 |
mydgf | txndc11 | ENSTRUP00000029366 | ENSTRUP00000039183 | Myeloid-derived growth factor. | Thioredoxin domain containing 11. | 0.493 |
mydgf | xbp1 | ENSTRUP00000029366 | ENSTRUP00000041380 | Myeloid-derived growth factor. | X-box binding protein 1. | 0.427 |
sacm1l | mrpl4 | ENSTRUP00000008517 | ENSTRUP00000021382 | SAC1 like phosphatidylinositide phosphatase a. | Mitochondrial ribosomal protein L4. | 0.411 |
sacm1l | mydgf | ENSTRUP00000008517 | ENSTRUP00000029366 | SAC1 like phosphatidylinositide phosphatase a. | Myeloid-derived growth factor. | 0.403 |
slc35b1 | mydgf | ENSTRUP00000058918 | ENSTRUP00000029366 | Solute carrier family 35 member B1. | Myeloid-derived growth factor. | 0.444 |
ssr4 | mydgf | ENSTRUP00000073499 | ENSTRUP00000029366 | Signal sequence receptor, delta. | Myeloid-derived growth factor. | 0.556 |
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