Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mydgfMyeloid-derived growth factor. (165 aa)    
Predicted Functional Partners:
cope
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
  
 0.687
txndc11
Thioredoxin domain containing 11.
   
  
 0.642
ssr4
Signal sequence receptor, delta.
   
  
 0.619
ENSTRUP00000076847
annotation not available
   
  
 0.619
sacm1l
SAC1 like phosphatidylinositide phosphatase a.
      
 0.616
prkcsh
Protein kinase C substrate 80K-H.
   
   0.595
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
   0.595
xbp1
X-box binding protein 1.
   
 
  0.562
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
   
  
 0.520
smim7
Small integral membrane protein 7.
   
  
 0.490
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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