close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fash1Achaete-scute family bHLH transcription factor 1b. (194 aa)    
Predicted Functional Partners:
LOC101079401
Transcription factor 3a.
   
 0.686
tcf3
Transcription factor 3b.
   
 0.686
tcf12
Transcription factor 12.
   
 0.686
TCF4
Transcription factor 4.
   
 0.686
LOC101072332
Transcription factor 12-like.
   
 0.682
dlx1
Distal-less homeobox 1a.
   
  
 0.468
LOC101065161
Uncharacterized protein.
   
 
 0.445
hes4
Hairy-related 9.
   
 
 0.445
LOC101074717
Hairy-related 8.2.
   
 
 0.445
hes1
Hairy-related 6.
   
 
 0.445
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.