STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD3Low density lipoprotein receptor class A domain containing 3. (340 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
    
 0.686
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.640
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.537
SUMF2
Sulfatase modifying factor 2.
    
 0.516
b4galt7
Beta1,4-galactosyltransferase 7.
    
 
 0.514
sacm1l
SAC1 like phosphatidylinositide phosphatase a.
    
 0.511
LOC101078337
Matrix-remodelling associated 8a.
      
 0.465
LOC101067091
Matrix-remodelling associated 8b.
      
 0.465
mfrp
Membrane frizzled-related protein.
    
 0.420
dph6
Diphthamine biosynthesis 6.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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