STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npm3Nucleophosmin/nucleoplasmin, 3. (158 aa)    
Predicted Functional Partners:
LOC101078706
Nucleophosmin 1a.
   
 
0.637
LOC101070917
Nucleophosmin 1b.
   
 
0.627
fbxw11
F-box and WD repeat domain containing 11b.
   
  
 0.604
fbxw4
F-box and WD repeat domain containing 4.
      
 0.578
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.566
tlx3
Homeobox domain-containing protein.
      
 0.561
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.548
fgf8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.504
LOC101067940
Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.
    
 
 0.474
tlx1
T cell leukemia homeobox 1.
      
 0.456
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.