STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
npm3Nucleophosmin/nucleoplasmin, 3. (158 aa)    
Predicted Functional Partners:
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.778
LOC101078706
Nucleophosmin 1a.
   
   0.767
LOC101070917
Nucleophosmin 1b.
   
   0.764
nepro
Nucleolus and neural progenitor protein.
    
   0.745
ncl
Nucleolin.
    
 
 0.730
LOC101071986
Uncharacterized protein.
    
 
 0.730
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.710
fbxw4
F-box and WD repeat domain containing 4.
      
 0.617
fbxw11
F-box and WD repeat domain containing 11b.
   
  
 0.606
tlx3
Homeobox domain-containing protein.
      
 0.589
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.