Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adamts8ADAM metallopeptidase with thrombospondin type 1 motif, 15b. (937 aa)    
Predicted Functional Partners:
LOC101067880
Brevican.
    
 0.594
LOC101063517
Versican core protein-like isoform X1.
    
 0.594
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
      
 0.518
pofut2
Protein O-fucosyltransferase 2.
     
 0.484
adamts12
Peptidase M12B domain-containing protein.
  
0.479
tsr1
TSR1 ribosome maturation factor.
      
 0.475
LOC101061607
Matrix metallopeptidase 14b (membrane-inserted).
    
 
 0.462
MMP23B
Matrix metallopeptidase 23B.
    
 
 0.456
dpy19l1
Dpy-19-like 1, like (H. sapiens).
      
 0.451
hapln2
Hyaluronan and proteoglycan link protein 2.
      
 0.445
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.