Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101076800Fascin. (557 aa)    
Predicted Functional Partners:
espn
Espin.
    
 0.630
ENSTRUP00000082088
Espin-like protein.
    
 0.630
LOC101073001
Twinfilin actin-binding protein 1a.
     
 0.596
H2SXQ0_TAKRU
Matrilin 3b.
      
 0.581
LOC101078847
Phosphatidylserine synthase 1b.
      
 0.581
MATN2
Matrilin 2.
      
 0.580
KCNS2
Potassium voltage-gated channel modifier subfamily S member 2; Belongs to the potassium channel family.
      
 0.580
ENSTRUP00000046456
Matrilin 3a.
      
 0.580
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
  
 0.578
pum2
Pumilio RNA-binding family member 2.
      
 0.571
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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