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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agxt2Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (512 aa)    
Predicted Functional Partners:
LOC101064586
Serine--pyruvate aminotransferase.
  
 0.978
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.956
pipox
Pipecolic acid oxidase.
  
 
 0.953
LOC101076940
Cysteine sulfinic acid decarboxylase.
 
 0.951
gad1
Glutamate decarboxylase 1a.
 
 0.950
LOC101068320
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
 
 0.948
LOC101064037
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.948
LOC101077479
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
 
 0.948
LOC101075052
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.948
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
  
 0.948
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.