STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc30a3Solute carrier family 30 member 2. (397 aa)    
Predicted Functional Partners:
LOC101076312
Solute carrier family 39 member 7.
    
 
 0.727
LOC101062206
Solute carrier family 39 member 14.
    
 
 0.725
LOC101069036
Uncharacterized protein.
    
 
 0.718
slc39a13
Solute carrier family 39 member 13.
    
 
 0.702
slc30a9
Solute carrier family 30 member 9.
      
 0.654
slc39a9
Solute carrier family 39 member 9.
      
 0.631
slc30a6
Solute carrier family 30 member 6.
    
 
 0.621
ENSTRUP00000065745
annotation not available
    
 
 0.621
ENSTRUP00000086753
annotation not available
    
 
 0.621
LOC101079294
Carrier domain-containing protein.
  
 
 0.520
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.