STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072109Kelch-like family member 41b. (601 aa)    
Predicted Functional Partners:
bbs9
Bardet-Biedl syndrome 9.
   
 0.895
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.894
bbs4
Bardet-Biedl syndrome 4.
    
 0.892
bbs1
Bardet-Biedl syndrome 1.
    
 0.890
Bbs2
Bardet-Biedl syndrome 2 protein.
    
 0.889
ttc8
Tetratricopeptide repeat domain 8.
    
 0.885
lztfl1
Leucine zipper transcription factor-like 1.
   
 0.853
ENSTRUP00000055378
BBSome interacting protein 1.
   
 0.753
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.590
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.582
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (18%) [HD]