STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptgirProstaglandin I2 receptor; Belongs to the G-protein coupled receptor 1 family. (377 aa)    
Predicted Functional Partners:
LOC101065996
GNAS complex locus.
    
 0.982
gnas
Uncharacterized protein.
    
 0.982
TBXA2R
Thromboxane A2 receptor.
    
 
0.906
rasef
RAS and EF-hand domain containing.
     
 0.574
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.561
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.561
gnb2
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.561
LOC101062348
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.561
GNG4
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.
    
  0.527
gng2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.527
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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