STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a4Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)    
Predicted Functional Partners:
vdac1
Voltage-dependent anion channel 1.
   
 0.989
LOC101069732
Voltage-dependent anion channel 2.
   
 0.970
VDAC2
Voltage dependent anion channel 2.
   
 0.970
LOC101069276
Zgc:56235.
   
 0.970
ppid
Peptidylprolyl isomerase D.
   
 0.917
LOC101067607
Cytochrome c oxidase subunit 5B2.
   
 0.906
slc25a5
Adenine nucleotide translocator s598; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
0.901
ants6
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.901
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.898
LOC101066705
Ubiquinol-cytochrome c reductase core protein 2a.
   
 0.876
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.