STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069313Transmembrane protein 110, like. (342 aa)    
Predicted Functional Partners:
LOC101071528
Macrophage stimulating 1 receptor a.
   
  0.542
mst1r
Macrophage stimulating 1 receptor b.
   
  0.542
met
Uncharacterized protein.
   
  0.542
map3k7cl
Map3k7 C-terminal like.
    
 0.482
LOC101077791
Uncharacterized protein.
   
 0.418
LOC101069844
Inositol polyphosphate phosphatase-like 1b.
    
 0.417
lnx1
Ligand of numb-protein X 1.
    
 0.417
lnx2
Ligand of numb-protein X 2a.
    
 0.417
inppl1
Inositol polyphosphate phosphatase-like 1a.
    
 0.417
zglp1
GATA-type domain-containing protein.
   
 
 0.409
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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