STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem59Transmembrane protein 59. (325 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
  
 0.842
dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2.
   
 0.807
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.800
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.800
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.798
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.788
bag2
BCL2 associated athanogene 2.
    
 0.773
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.769
rpl18
Ribosomal protein L18.
   
 
 0.764
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.752
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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