STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (773 aa)    
Predicted Functional Partners:
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
0.999
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
0.998
LOC101068384
Tumor susceptibility gene 101 protein-like.
    
 0.969
LOC101079670
Tumor susceptibility 101a.
    
 0.969
chmp2a
Charged multivesicular body protein 2A.
    
 0.964
rps27a
Ribosomal protein S27a.
    
 0.956
LOC101077791
Uncharacterized protein.
    
 0.926
usp8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
   
 0.921
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.882
vps25
Vacuolar protein sorting 25 homolog.
    
 0.868
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]