STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbck1RanBP-type and C3HC4-type zinc finger containing 1. (517 aa)    
Predicted Functional Partners:
sharpin
SHANK-associated RH domain interacting protein.
   
0.997
LOC115247907
Si:dkey-181m9.8.
   
 0.989
LOC101068646
E3 ubiquitin-protein ligase RNF31-like.
   
 0.989
rnf31
Uncharacterized protein.
   
 0.989
LOC101065618
E3 ubiquitin-protein ligase RNF31-like isoform X1.
   
 0.989
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.982
LOC101067395
X-linked inhibitor of apoptosis.
   
 0.967
LOC101075537
Baculoviral IAP repeat containing 2.
   
 0.960
LOC101065898
OTU deubiquitinase with linear linkage specificity.
    
 0.959
H2SAI0_TAKRU
Receptor-interacting serine-threonine kinase 2.
   
 0.935
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.