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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm14PR domain containing 14. (602 aa)    
Predicted Functional Partners:
cbfa2t2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
 0.858
lef1
Lymphoid enhancer-binding factor 1.
    
 0.710
LOC101074260
POU domain protein.
   
 0.692
LOC101075116
Lin-28 homolog A.
   
 0.649
LOC101073057
Fork-head domain-containing protein.
    
 0.647
LOC101077059
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.616
PRDM6
PR/SET domain 6.
    
 
0.602
cbfa2t3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
 0.597
runx1t1
RUNX1 partner transcriptional co-repressor 1.
   
 0.597
LOC101078177
Proto-oncogene c-Fos; Nuclear phosphoprotein which forms a tight but non-covalently linked complex with the JUN/AP-1 transcription factor. FOS has a critical function in regulating the development of cells destined to form and maintain the skeleton. It is thought to have an important role in signal transduction, cell proliferation and differentiation (By similarity).
    
 0.582
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.