Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061077Tctex1 domain containing 1. (177 aa)    
Predicted Functional Partners:
dynlt3
Dynein light chain Tctex-type 3.
    
 0.925
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
   
 0.916
LOC101078390
Dynein light chain.
    
 0.915
LOC101063088
Dynein light chain.
    
 0.915
DYNLL2
Dynein light chain.
    
 0.915
DYNLRB1
Dynein light chain roadblock.
   
 0.896
dynlt1
Dynein, light chain, Tctex-type 1.
    
 0.892
dnal4
Dynein light chain.
    
 0.883
wdr34
WD repeat domain 34.
    
 0.868
dynlrb2
Dynein light chain roadblock-type 2.
   
 0.844
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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