Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC101069382Crystallin, beta A1, like 2; Belongs to the beta/gamma-crystallin family. (208 aa)    
Predicted Functional Partners:
tmem33
Transmembrane protein 33.
      
 0.586
SCYL1
SCY1 like pseudokinase 1.
      
 0.517
H2UEX4_TAKRU
Ig-like domain-containing protein.
      
 0.516
LOC101061816
Lens intrinsic membrane protein 2.2.
      
 0.487
anxa5
Annexin.
      
 0.430
anxa10
Annexin.
      
 0.430
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
      
 0.429
naa15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a.
      
 0.429
tm4sf5-2
Si:ch211-137i24.10.
  
     0.415
LOC101074094
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.406
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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