Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl11Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (194 aa)    
Predicted Functional Partners:
mrpl12
Mitochondrial ribosomal protein L12.
  
 
 0.994
mrpl16
Mitochondrial ribosomal protein L16.
  
 0.990
ENSTRUP00000047893
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.989
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.986
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.986
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.986
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.985
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.985
Mrpl21
Uncharacterized protein.
  
 
 0.984
mrpl4
Mitochondrial ribosomal protein L4.
  
 
 0.983
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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