Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC17Leucine rich repeat containing 17. (464 aa)    
Predicted Functional Partners:
LOC101070052
Thrombospondin 4b.
    
 0.603
LOC101072674
Growth differentiation factor 2.
    
 0.594
LOC101064121
Glutamate receptor, ionotropic, AMPA 3a.
    
 0.525
bmp10
Bone morphogenetic protein 10.
    
 0.482
LOC101065466
Taste receptor, type 1, member 3.
    
 
 0.475
tas1r3
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 
 0.475
adcy1
Adenylate cyclase type 1; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
    
 
 0.459
nptn
Neuroplastin isoform X1.
    
 0.421
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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