STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacrgPARK2 co-regulated. (228 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
 
 0.988
LOC101074513
EF-hand domain (C-terminal) containing 1.
  
 
 0.966
H2SLX9_TAKRU
Enkurin domain-containing protein.
   
 
 0.935
efhb
Uncharacterized protein.
   
   0.885
cfap52
Cilia and flagella associated protein 52.
   
 
 0.797
cfap45
Cilia and flagella associated protein 45.
    
 
 0.779
tekt2
Tektin 2 (testicular).
   
 
 0.761
ENSTRUP00000053744
Uncharacterized protein.
   
 
 0.760
tekt3
Tektin 3.
   
 
 0.751
mns1
Meiosis-specific nuclear structural 1.
    
 
 0.746
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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