STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD2Sushi domain containing 2. (812 aa)    
Predicted Functional Partners:
ENSTRUP00000038979
Sushi domain containing 1.
     
 0.588
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
      
 0.566
LOC101070023
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.539
ism1
Isthmin 1.
      
 0.507
LOC101080081
Transmembrane p24 trafficking protein 7.
      
 0.491
tsr1
TSR1 ribosome maturation factor.
      
 0.435
camk4
Calcium/calmodulin-dependent protein kinase IV; Belongs to the protein kinase superfamily.
      
 0.432
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.