Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101066068 | LOC101073015 | ENSTRUP00000059012 | ENSTRUP00000074929 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | BCL2 interacting protein 1b. | 0.987 |
LOC101066068 | SEC22B | ENSTRUP00000059012 | ENSTRUP00000049725 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. | 0.901 |
LOC101066068 | nbas | ENSTRUP00000059012 | ENSTRUP00000040434 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | Neuroblastoma amplified sequence. | 0.796 |
LOC101066068 | rint1 | ENSTRUP00000059012 | ENSTRUP00000031594 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | RAD50 interactor 1. | 0.856 |
LOC101066068 | rps6kc1 | ENSTRUP00000059012 | ENSTRUP00000035241 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | Ribosomal protein S6 kinase polypeptide 1. | 0.639 |
LOC101066068 | sec22a | ENSTRUP00000059012 | ENSTRUP00000036409 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. | 0.495 |
LOC101066068 | snx15 | ENSTRUP00000059012 | ENSTRUP00000039770 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | Sorting nexin 15. | 0.639 |
LOC101066068 | stx18 | ENSTRUP00000059012 | ENSTRUP00000081966 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | Syntaxin 18. | 0.992 |
LOC101066068 | use1 | ENSTRUP00000059012 | ENSTRUP00000049699 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | Unconventional SNARE in the ER 1 homolog (S. cerevisiae). | 0.988 |
LOC101066068 | zw10 | ENSTRUP00000059012 | ENSTRUP00000079156 | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | Zw10 kinetochore protein. | 0.856 |
LOC101073015 | LOC101066068 | ENSTRUP00000074929 | ENSTRUP00000059012 | BCL2 interacting protein 1b. | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | 0.987 |
LOC101073015 | SEC22B | ENSTRUP00000074929 | ENSTRUP00000049725 | BCL2 interacting protein 1b. | SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. | 0.987 |
LOC101073015 | nbas | ENSTRUP00000074929 | ENSTRUP00000040434 | BCL2 interacting protein 1b. | Neuroblastoma amplified sequence. | 0.827 |
LOC101073015 | rint1 | ENSTRUP00000074929 | ENSTRUP00000031594 | BCL2 interacting protein 1b. | RAD50 interactor 1. | 0.994 |
LOC101073015 | sec22a | ENSTRUP00000074929 | ENSTRUP00000036409 | BCL2 interacting protein 1b. | SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. | 0.870 |
LOC101073015 | stx18 | ENSTRUP00000074929 | ENSTRUP00000081966 | BCL2 interacting protein 1b. | Syntaxin 18. | 0.990 |
LOC101073015 | use1 | ENSTRUP00000074929 | ENSTRUP00000049699 | BCL2 interacting protein 1b. | Unconventional SNARE in the ER 1 homolog (S. cerevisiae). | 0.999 |
LOC101073015 | zw10 | ENSTRUP00000074929 | ENSTRUP00000079156 | BCL2 interacting protein 1b. | Zw10 kinetochore protein. | 0.854 |
SEC22B | LOC101066068 | ENSTRUP00000049725 | ENSTRUP00000059012 | SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. | SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. | 0.901 |
SEC22B | LOC101073015 | ENSTRUP00000049725 | ENSTRUP00000074929 | SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. | BCL2 interacting protein 1b. | 0.987 |
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