STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gata6GATA binding protein 6. (510 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 0.848
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.763
zfpm2
Zinc finger protein, FOG family member 2a.
    
 0.737
LOC101076886
Forkhead box A3.
   
 0.720
lmcd1
LIM and cysteine-rich domains 1.
    
 0.698
LOC101070183
Forkhead box A2.
    
 0.608
H2US63_TAKRU
Fork-head domain-containing protein.
    
 0.608
LOC101065935
T-cell acute lymphocytic leukemia protein 1; Transcription factor that plays a pivotal role in hemopoietic and endothelial development.
   
 0.598
ENSTRUP00000081256
T-cell acute lymphocytic leukemia protein 1.
   
 0.598
nfyb
Nuclear transcription factor Y, beta a.
    
 
 0.582
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.