STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bckdkProtein-serine/threonine kinase. (428 aa)    
Predicted Functional Partners:
LOC101062380
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
 
    
 0.894
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
 
 
  
 0.884
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
 
    
 0.860
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
 
 
  
 0.856
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
 
 
  
 0.851
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
    
 0.760
dlat
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.756
pdhx
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.756
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.709
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.707
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.