STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069462Proteasome subunit beta. (283 aa)    
Predicted Functional Partners:
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.929
psma3
Proteasome subunit alpha type.
   
 0.925
psmb2
Proteasome subunit beta.
   
 0.925
psmb3
Proteasome subunit beta.
   
 0.921
psmb1
Proteasome subunit beta.
   
 0.917
psma5
Proteasome subunit alpha type.
   
 0.915
LOC101077988
Proteasome subunit beta 12.
  
0.913
psma1
Proteasome subunit alpha type.
   
 0.911
LOC101065848
Proteasome subunit beta 9a.
  
0.911
psma4
Proteasome subunit alpha type.
   
 0.909
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.