STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105417910Uncharacterized protein. (848 aa)    
Predicted Functional Partners:
derl2
Derlin-2/3.
   
 0.937
erlec1
Endoplasmic reticulum lectin 1.
   
 0.875
os9
OS9 endoplasmic reticulum lectin.
   
 0.875
syvn1
Synovial apoptosis inhibitor 1, synoviolin.
   
 0.868
amfr
Autocrine motility factor receptor b.
   
 0.868
spata5l1
Spermatogenesis associated 5-like 1.
  
 0.789
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
  
 0.789
SPATA5
ATPase family protein 2 homolog.
  
 0.789
rnf139
Ring finger protein 139.
    
 0.710
LOC101062733
Zmp:0000000662.
    
 0.710
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.