STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
n6amt1N-6 adenine-specific DNA methyltransferase 1. (193 aa)    
Predicted Functional Partners:
trmt112
tRNA methyltransferase subunit 11-2.
    
 0.998
mtrf1
Mitochondrial translational release factor 1.
  
 
 0.880
etf1
Eukaryotic translation termination factor 1b.
    
 0.878
cpox
Coproporphyrinogen oxidase.
   
 
 0.855
mtrf1l
Mitochondrial translational release factor 1-like.
  
 
 0.853
Fech
Protoporphyrin/coproporphyrin ferrochelatase.
    
 0.848
c21h12orf65
Probable peptide chain release factor C12orf65 homolog, mitochondrial.
  
 
 0.834
NAMPT
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
  
 
 0.834
ENSTRUP00000086091
DUF5598 domain-containing protein.
  
 
 0.834
trmt11
UPF0020 domain-containing protein.
      
 0.655
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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