STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd9Major facilitator superfamily domain containing 9. (472 aa)    
Predicted Functional Partners:
tmem182
Transmembrane protein 182a.
      
 0.770
inpp4a
Inositol polyphosphate-4-phosphatase type I Aa.
      
 0.742
mfsd10
Major facilitator superfamily domain containing 10.
  
   
0.638
aagab
Alpha and gamma adaptin binding protein.
      
 0.575
svop
SV2 related protein a.
   
  
 0.571
mfsd4b
Major facilitator superfamily domain containing 4B.
      
 0.566
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.566
slc46a2
Solute carrier family 46 member 2.
   
  
 0.566
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.561
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
      
 0.559
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.