STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ralgps1Ral GEF with PH domain and SH3 binding motif 1. (579 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 0.775
LOC101061204
Uncharacterized protein.
   
 0.775
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.644
LOC101076633
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.644
LOC101071528
Macrophage stimulating 1 receptor a.
    
 0.589
mst1r
Macrophage stimulating 1 receptor b.
    
 0.589
met
Uncharacterized protein.
    
 0.589
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.585
LOC101065989
CRK proto-oncogene, adaptor protein.
    
 0.585
LOC101077802
Uncharacterized protein.
   
 0.576
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.