STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syt10Synaptotagmin X. (549 aa)    
Predicted Functional Partners:
H2UX54_TAKRU
PTPRF interacting protein alpha 2.
   
 
 0.642
LOC101077791
Uncharacterized protein.
     
 0.627
LOC101070615
Vesicle-associated membrane protein 5.
   
 0.559
LOC101071071
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.559
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.538
gys2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
      
 0.516
Rimbp2
RIMS-binding protein 2 isoform X1.
     
 0.514
kcnc2
Potassium voltage-gated channel, Shaw-related subfamily, member 2; Belongs to the potassium channel family.
   
  
 0.513
camk2n2
Calcium/calmodulin-dependent protein kinase II inhibitor 2.
   
  
 0.500
stxbp6
Syntaxin binding protein 6 (amisyn).
      
 0.495
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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