STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rap2bRAP2B, member of RAS oncogene family. (183 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
   
 0.832
LOC101070245
Zgc:171558.
    
 0.753
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.746
LOC101071528
Macrophage stimulating 1 receptor a.
   
 0.643
mst1r
Macrophage stimulating 1 receptor b.
   
 0.643
met
Uncharacterized protein.
   
 0.643
araf
Uncharacterized protein.
   
 0.625
raf1
Uncharacterized protein.
   
 0.625
braf
Uncharacterized protein.
   
 0.625
LOC101068679
Rap guanine nucleotide exchange factor (GEF) 3.
    
 0.600
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.