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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065574Neural cell adhesion molecule L1; Neural cell adhesion molecule involved in the dynamics of cell adhesion and in the generation of transmembrane signals at tyrosine kinase receptors. During brain development, critical in multiple processes, including neuronal migration, axonal growth and fasciculation, and synaptogenesis. In the mature brain, plays a role in the dynamics of neuronal structure and function, including synaptic plasticity. (1274 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
0.967
LOC101075535
Neural cell adhesion molecule 1a.
   
0.937
ncam2
Zgc:152904.
   
0.937
H2V5K3_TAKRU
Uncharacterized protein.
   
0.937
ncam1
Neural cell adhesion molecule 1b.
   
0.937
LOC101079126
Contactin 3a, tandem duplicate 2.
    
0.624
LOC101065697
Contactin 3b.
    
0.622
LOC101067632
Carbonic anhydrase XVI b.
    
 0.603
H2RLD0_TAKRU
Protein tyrosine phosphatase receptor type G.
    
 0.603
ENSTRUP00000080191
annotation not available
    
 0.602
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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