STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067572Uncharacterized protein. (589 aa)    
Predicted Functional Partners:
Il-20
Interleukin 19 like.
    
 0.991
ENSTRUP00000067131
annotation not available
   
 0.968
LOC101071242
Interleukin 10 receptor, beta.
     
 0.740
jak1
Tyrosine-protein kinase.
     
 0.594
LOC101073316
Tyrosine-protein kinase.
     
 0.579
LOC101068778
Tyrosine-protein kinase.
     
 0.579
tyk2
Tyrosine-protein kinase.
     
 0.579
tp53bp2
Tumor protein p53 binding protein, 2a.
     
 0.543
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
     
 0.543
ENSTRUP00000054590
Uncharacterized protein.
  
   
 0.525
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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