STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
svopSV2 related protein a. (548 aa)    
Predicted Functional Partners:
PDCL3
Phosducin like 3.
 
      0.845
mfsd10
Major facilitator superfamily domain containing 10.
   
  
 0.589
mfsd9
Major facilitator superfamily domain containing 9.
   
  
 0.571
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.566
LOC101066429
Si:dkey-10o6.2; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.566
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.556
coq9
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
      
 0.546
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
      
 0.527
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
  
 0.517
LOC101076667
Major facilitator superfamily domain containing 2B.
      
 0.485
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.