STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE1Zinc finger FYVE-type containing 1. (787 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
    
 0.926
LOC101071812
Si:ch211-11n16.2.
  
  
 
0.902
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.835
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.835
rps27a
Ribosomal protein S27a.
    
 0.824
LOC101078992
UEV domain-containing protein.
    
 0.803
LOC101068384
Tumor susceptibility gene 101 protein-like.
    
 0.765
LOC101079670
Tumor susceptibility 101a.
    
 0.765
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.724
chmp2a
Charged multivesicular body protein 2A.
    
 0.721
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.