STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNA5Ephrin-A5b; Belongs to the ephrin family. (229 aa)    
Predicted Functional Partners:
LOC101069728
Eph receptor A2 b.
   
 0.959
LOC101073085
Eph receptor A2 a.
   
 0.931
H2RIU2_TAKRU
Uncharacterized protein.
   
 0.771
ntrk1
Tyrosine-protein kinase receptor.
    
 0.750
ENSTRUP00000063292
BDNF/NT-3 growth factors receptor-like isoform X1.
    
 0.750
met
Uncharacterized protein.
   
 0.744
LOC101063508
Ephrin-B3a; Belongs to the ephrin family.
     
 0.725
epha3
Eph receptor A3.
   
 0.724
LOC101079603
Tyrosine-protein kinase receptor.
    
 0.711
LOC101063427
Tyrosine-protein kinase receptor.
    
 0.711
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.