STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spon2Spondin 2b, extracellular matrix protein. (338 aa)    
Predicted Functional Partners:
adar
Adenosine deaminase RNA specific.
      
 0.564
thrap3
Thyroid hormone receptor associated protein 3b.
      
 0.548
pofut2
Protein O-fucosyltransferase 2.
     
 0.540
LOC101066137
C-terminal-binding protein 1-like isoform X1.
   
  
 0.534
CTBP1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  
 0.534
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.502
cdkn1b
Cyclin-dependent kinase inhibitor 1Bb.
      
 0.459
bmp6
Bone morphogenetic protein 6.
      
 0.452
slc25a4
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.451
fgfrl1
Fibroblast growth factor receptor like 1a.
      
 0.451
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (26%) [HD]