STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcbld2Discoidin, CUB and LCCL domain containing 2. (688 aa)    
Predicted Functional Partners:
LOC101069682
Leucine rich repeat containing 32.
      
 0.715
phf3
PHD finger protein 3.
  
   
 0.669
commd7
COMM domain containing 7.
      
 0.630
LOC101066439
Endothelial cell adhesion molecule a.
      
 0.609
bambi
BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a.
      
 0.584
fgg
Fibrinogen gamma chain.
      
 0.426
nbeal2
Neurobeachin-like 2.
      
 0.422
lmbrd1
LMBR1 domain containing 1.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.