STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fibinFin bud initiation factor b. (205 aa)    
Predicted Functional Partners:
LOC101065208
Usher syndrome 1C.
      
 0.754
LOC101064546
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
      
 0.677
znf536
Zinc finger protein 536.
      
 0.660
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.658
zfc3h1
zf-C3H1 domain-containing protein.
      
 0.652
CPNE8
Copine 8.
      
 0.652
LOC101065210
Copine VIII.
      
 0.652
tbc1d15
TBC1 domain family, member 15.
      
 0.648
tspan8
Tetraspanin.
      
 0.536
tmem204
Transmembrane protein 204.
  
   
 0.439
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.