STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap23Rho GTPase activating protein 23a. (1818 aa)    
Predicted Functional Partners:
LOC101062336
Coiled-coil domain containing 85C, b.
    
 
 0.465
LOC101075302
Ras homolog family member F.
    
 0.453
rnd3
Rho family GTPase 3a.
    
 0.438
LOC101064615
Rho family GTPase 1b.
    
 0.438
RND1
Rho family GTPase 1.
    
 0.438
LOC101076287
Ras homolog gene family, member Gd.
   
 0.436
LOC101073689
Ras homolog family member Gb.
   
 0.436
ccdc51
Coiled-coil domain containing 51.
      
 0.433
LOC101073733
Uncharacterized protein.
   
 0.415
LOC101067723
Cell division cycle 42.
   
 0.415
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.