Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101069088 | Mrpl21 | ENSTRUP00000031116 | ENSTRUP00000015393 | RNA pseudouridine synthase D4. | Uncharacterized protein. | 0.779 |
LOC101069088 | fuom | ENSTRUP00000031116 | ENSTRUP00000035328 | RNA pseudouridine synthase D4. | Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.782 |
LOC101069088 | gtpbp3 | ENSTRUP00000031116 | ENSTRUP00000009026 | RNA pseudouridine synthase D4. | GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.828 |
LOC101069088 | mrm3 | ENSTRUP00000031116 | ENSTRUP00000003564 | RNA pseudouridine synthase D4. | SpoU_sub_bind domain-containing protein. | 0.824 |
LOC101069088 | mrpl11 | ENSTRUP00000031116 | ENSTRUP00000029806 | RNA pseudouridine synthase D4. | Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 0.748 |
LOC101069088 | mrpl15 | ENSTRUP00000031116 | ENSTRUP00000018634 | RNA pseudouridine synthase D4. | Mitochondrial ribosomal protein L15. | 0.727 |
LOC101069088 | mrpl17 | ENSTRUP00000031116 | ENSTRUP00000059125 | RNA pseudouridine synthase D4. | Mitochondrial ribosomal protein L17. | 0.776 |
LOC101069088 | pus7l | ENSTRUP00000031116 | ENSTRUP00000042837 | RNA pseudouridine synthase D4. | Pseudouridine synthase 7 like. | 0.798 |
LOC101069088 | rpusd1 | ENSTRUP00000031116 | ENSTRUP00000007104 | RNA pseudouridine synthase D4. | RNA pseudouridine synthase domain containing 1. | 0.403 |
LOC101069088 | rpusd2 | ENSTRUP00000031116 | ENSTRUP00000079232 | RNA pseudouridine synthase D4. | RNA pseudouridine synthase domain containing 2. | 0.567 |
Mrpl21 | LOC101069088 | ENSTRUP00000015393 | ENSTRUP00000031116 | Uncharacterized protein. | RNA pseudouridine synthase D4. | 0.779 |
Mrpl21 | fuom | ENSTRUP00000015393 | ENSTRUP00000035328 | Uncharacterized protein. | Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.925 |
Mrpl21 | gtpbp3 | ENSTRUP00000015393 | ENSTRUP00000009026 | Uncharacterized protein. | GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.908 |
Mrpl21 | mrm3 | ENSTRUP00000015393 | ENSTRUP00000003564 | Uncharacterized protein. | SpoU_sub_bind domain-containing protein. | 0.919 |
Mrpl21 | mrpl11 | ENSTRUP00000015393 | ENSTRUP00000029806 | Uncharacterized protein. | Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 0.998 |
Mrpl21 | mrpl15 | ENSTRUP00000015393 | ENSTRUP00000018634 | Uncharacterized protein. | Mitochondrial ribosomal protein L15. | 0.998 |
Mrpl21 | mrpl17 | ENSTRUP00000015393 | ENSTRUP00000059125 | Uncharacterized protein. | Mitochondrial ribosomal protein L17. | 0.999 |
Mrpl21 | pus7l | ENSTRUP00000015393 | ENSTRUP00000042837 | Uncharacterized protein. | Pseudouridine synthase 7 like. | 0.774 |
Mrpl21 | rpusd1 | ENSTRUP00000015393 | ENSTRUP00000007104 | Uncharacterized protein. | RNA pseudouridine synthase domain containing 1. | 0.779 |
Mrpl21 | rpusd2 | ENSTRUP00000015393 | ENSTRUP00000079232 | Uncharacterized protein. | RNA pseudouridine synthase domain containing 2. | 0.779 |
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