STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fscn2Fascin. (490 aa)    
Predicted Functional Partners:
H2TTQ9_TAKRU
Uncharacterized protein.
      
 0.653
LOC101073001
Twinfilin actin-binding protein 1a.
     
 0.547
H2SXQ0_TAKRU
Matrilin 3b.
      
 0.531
LOC101078847
Phosphatidylserine synthase 1b.
      
 0.531
MATN2
Matrilin 2.
      
 0.530
KCNS2
Potassium voltage-gated channel modifier subfamily S member 2; Belongs to the potassium channel family.
      
 0.530
ENSTRUP00000046456
Matrilin 3a.
      
 0.530
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
  
 0.528
pum2
Pumilio RNA-binding family member 2.
      
 0.521
lcp1
Uncharacterized protein.
     
 0.481
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.