STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074122Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
tnni1
Troponin I type 1a (skeletal, slow).
 
 0.913
LOC101068009
Troponin I4b, tandem duplicate 2.
 
 0.860
H2V1W2_TAKRU
Troponin I4b, tandem duplicate 2.
 
 0.856
TNNI2
Troponin I type 2b (skeletal, fast), tandem duplicate 1.
 
 0.842
LOC101070646
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.836
LOC101065088
Uncharacterized protein.
 
 0.833
LOC101076809
Uncharacterized protein.
   
 0.804
ENSTRUP00000042560
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
   
 0.804
LOC115250956
Troponin I2, fast skeletal type.
   
 0.804
TNNC1
Troponin C type 1b (slow).
   
 0.774
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.