STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000043867annotation not available (590 aa)    
Predicted Functional Partners:
LOC101076080
Clusterin; Belongs to the clusterin family.
   
  
 0.731
ENSTRUP00000059764
annotation not available
   
  
 0.731
LOC101068676
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
  
 0.709
LOC619285
Rhodopsin.
   
  
 0.494
LOC778011
Rhodopsin.
   
  
 0.494
rho
Rhodopsin.
   
  
 0.494
LOC101079163
Rhodopsin.
   
  
 0.494
clu
Clusterin; Belongs to the clusterin family.
   
  
 0.455
LOC101070147
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
  
 0.453
LOC101074252
Retinal G protein coupled receptor a.
   
  
 0.419
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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