STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srsf11Serine and arginine rich splicing factor 11. (484 aa)    
Predicted Functional Partners:
pnisr
PNN-interacting serine/arginine-rich protein.
   
 
 0.736
srrm1
Serine/arginine repetitive matrix 1.
   
 0.732
srsf7
Serine and arginine rich splicing factor 7a.
   
 0.716
Srsf10
RRM domain-containing protein.
   
 0.712
LOC101079137
Serine/arginine-rich splicing factor 9-like.
   
 0.700
LOC105417833
RRM domain-containing protein.
   
 0.682
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.682
LOC101070858
Serine and arginine rich splicing factor 2a.
   
 0.679
LOC101074667
RRM domain-containing protein.
   
0.679
pabpn1
Poly(A) binding protein, nuclear 1.
   
 0.652
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.