Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2TJ00_TAKRU | LOC101080224 | ENSTRUP00000061437 | ENSTRUP00000045558 | MNNL domain-containing protein. | Notch receptor 2. | 0.942 |
H2TJ00_TAKRU | jag1 | ENSTRUP00000061437 | ENSTRUP00000080718 | MNNL domain-containing protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.900 |
H2TJ00_TAKRU | jag2 | ENSTRUP00000061437 | ENSTRUP00000034229 | MNNL domain-containing protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.900 |
H2TJ00_TAKRU | rbpj | ENSTRUP00000061437 | ENSTRUP00000080357 | MNNL domain-containing protein. | Recombination signal binding protein for immunoglobulin kappa J region. | 0.422 |
H2TJ00_TAKRU | rbpjl | ENSTRUP00000061437 | ENSTRUP00000067675 | MNNL domain-containing protein. | Recombining binding protein suppressor of hairless-like protein isoform X1. | 0.422 |
LOC101072040 | LOC101080224 | ENSTRUP00000080722 | ENSTRUP00000045558 | NUMB like endocytic adaptor protein. | Notch receptor 2. | 0.942 |
LOC101072040 | NCSTN | ENSTRUP00000080722 | ENSTRUP00000087925 | NUMB like endocytic adaptor protein. | Nicastrin. | 0.507 |
LOC101072040 | numb | ENSTRUP00000080722 | ENSTRUP00000079332 | NUMB like endocytic adaptor protein. | NUMB endocytic adaptor protein. | 0.903 |
LOC101073848 | LOC101080224 | ENSTRUP00000056359 | ENSTRUP00000045558 | MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. | Notch receptor 2. | 0.922 |
LOC101077303 | LOC101080224 | ENSTRUP00000006029 | ENSTRUP00000045558 | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | Notch receptor 2. | 0.924 |
LOC101077303 | NCSTN | ENSTRUP00000006029 | ENSTRUP00000087925 | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | Nicastrin. | 0.993 |
LOC101080224 | H2TJ00_TAKRU | ENSTRUP00000045558 | ENSTRUP00000061437 | Notch receptor 2. | MNNL domain-containing protein. | 0.942 |
LOC101080224 | LOC101072040 | ENSTRUP00000045558 | ENSTRUP00000080722 | Notch receptor 2. | NUMB like endocytic adaptor protein. | 0.942 |
LOC101080224 | LOC101073848 | ENSTRUP00000045558 | ENSTRUP00000056359 | Notch receptor 2. | MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. | 0.922 |
LOC101080224 | LOC101077303 | ENSTRUP00000045558 | ENSTRUP00000006029 | Notch receptor 2. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.924 |
LOC101080224 | NCSTN | ENSTRUP00000045558 | ENSTRUP00000087925 | Notch receptor 2. | Nicastrin. | 0.929 |
LOC101080224 | jag1 | ENSTRUP00000045558 | ENSTRUP00000080718 | Notch receptor 2. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.959 |
LOC101080224 | jag2 | ENSTRUP00000045558 | ENSTRUP00000034229 | Notch receptor 2. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.953 |
LOC101080224 | numb | ENSTRUP00000045558 | ENSTRUP00000079332 | Notch receptor 2. | NUMB endocytic adaptor protein. | 0.943 |
LOC101080224 | rbpj | ENSTRUP00000045558 | ENSTRUP00000080357 | Notch receptor 2. | Recombination signal binding protein for immunoglobulin kappa J region. | 0.984 |
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